Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919779.1_cds_XP_016468967.1_61551
CDS Infomation

[gene=LOC107791421] [db_xref=GeneID:107791421] [protein=pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like] [protein_id=XP_016468967.1] [location=join(4505..4774,7026..8261)] [gbkey=CDS]
Sequence

ATGATCCGGAATTTGACCCGCCAGATTTCAAAGGAAACACCAGTCAACGTCAGAAGACTA
TGTACCACGGCGGCAGCGGCGGTGAAGGAGGAGCAGTGTGAAGGAGACCGGCGGCTCTAC
CTGAGATTGTGGGCTTTGGAAGCTACAAATGGGTCGGTTAGTGAAACAATAAATGAGTAC
ATTGGAAAAGGCAGAGTTTTGAAGAAGTATGAACTGAACAAATGCATAAAGGAGCTGCGT
AAACATAGACGATATCAACATGCCCTTGAGATAATGGACTGGATGGAGAGAAGAGGTATA
AAATTGTCGTTTGGTGATTATGGAGTACGGTTAGATCTCATAGCAAAAGTTCAAGGAATA
ACTGCAGCTGAAAATTACTTTGGCAGCCTCTCACCTTCGATGCAGATTCAAAGCACTTAT
GGAGCACTCTTGCATTGCTACTGTGTTGAAAAAATGACAGACAAGGCATTGTCCCTCTTT
GAGAAAATGGATCAATTGAACTTCGCATCTAATTCATGGCAATTCAACAATCTTATGTCC
TTATATATGAGACTAGGGCAACCAGAAAAAGTACCCCCCTTGGTACAGGAAATGAAGAGT
AGAAAGGTTCCACTATGTACATTTTCGTATAGTATCTTGATGAATAGCTATTCTTGTTTA
GATGATATAGAAGGAGTGGAAAGAGTCTTTGAGGAGATAAAGCAGGAGAATGTAGAGGAG
TGCGATTGGACCATTTATAGTAACTTGGCTGTTGCTTATGTTAAGGCTGGGCTTCATGAC
AAAGCTGAGTTAGCTCTAAAGAAGCTTGAGGAAGAGATGGGACCTCGTAATCGTGAGGCA
TACCACTATTTGATTAGTTTGCATGCCGGAATATCTAATCTTGTTGAGGTTTATCGTATT
TGGAATTCTCTAAAGTCTGGTTTCTTGGAAATAACCAATTCTAGTTATCTTGTCATGTTT
CAGTCCCTCAGTAAGCTTAATGACATGGATGGTTTAAAGAAATGCTATGAGGAATGGGAA
TCGAGCTGCCCTAGTTACACTATGAGGCTGCCAAATAATGTCATTAGTGCTTATCTGAGA
AATGACATGCTACATGATGCGGAGGAAGTTTTTCTTCGTGGTTTGAAGCGATCACAAGGA
CCTTTCTTCTTGGCTTGGGAAATGTTCATAGCATTCTTTTTGAGGCATCATCGAATTGAT
CTTGCTATGGAGTGCCTGGAAGCAGTTGTATTCCTTGTAAAGGAGAATGAATGGCAACCA
AAATGTGAAACAATAAATAAATTTCTCGAGTATTTTGTAGAAGAGAGAGATGTTGGTGGT
GCTGAGGAGTTCTACAAGTATTTGAAAAAGCTGAATTGTCTTAGTAGTGATATATATAGT
TTATTGCTTCGCACTTACATAGCTGCCAACAGAACAGCAGACGATATGCTAGTGAGAATT
AAGGAAGATGGAATTGAAATGAGCTGCGAGCTCGAAGGCTTGCTTAAAAGGGTTTGTCCT
GAATAA

Peptide Sequence

PEP ID

XP_016468967.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like [Nicotiana tabacum]
Sequence

MIRNLTRQISKETPVNVRRLCTTAAAAVKEEQCEGDRRLYLRLWALEATNGSVSETINEY
IGKGRVLKKYELNKCIKELRKHRRYQHALEIMDWMERRGIKLSFGDYGVRLDLIAKVQGI
TAAENYFGSLSPSMQIQSTYGALLHCYCVEKMTDKALSLFEKMDQLNFASNSWQFNNLMS
LYMRLGQPEKVPPLVQEMKSRKVPLCTFSYSILMNSYSCLDDIEGVERVFEEIKQENVEE
CDWTIYSNLAVAYVKAGLHDKAELALKKLEEEMGPRNREAYHYLISLHAGISNLVEVYRI
WNSLKSGFLEITNSSYLVMFQSLSKLNDMDGLKKCYEEWESSCPSYTMRLPNNVISAYLR
NDMLHDAEEVFLRGLKRSQGPFFLAWEMFIAFFLRHHRIDLAMECLEAVVFLVKENEWQP
KCETINKFLEYFVEERDVGGAEEFYKYLKKLNCLSSDIYSLLLRTYIAANRTADDMLVRI
KEDGIEMSCELEGLLKRVCPE

Transcript Sequence

Gene sequence data has not been registered.